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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
FANhyb_rscf00000056.1.g00008.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
NAC |
Protein Properties |
Length: 347aa MW: 39508 Da PI: 4.7821 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00000056.1.g00008.1 | genome | kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 180.9 | 3.1e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknra 77
lppGfrFhPtdeelv +yL +k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nra
FANhyb_rscf00000056.1.g00008.1 6 LPPGFRFHPTDEELVAYYLDRKINGRTIEL-EIIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRA 83
79****************************.99**************96435566888********************* PP
NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
t++gyWkatgkd++v s ++++vg+kktLv+y+grap+g +t+Wvmheyrl
FANhyb_rscf00000056.1.g00008.1 84 TRAGYWKATGKDRAVNS-NRRAVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133
****************9.9999***************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MAPMTLPPGF RFHPTDEELV AYYLDRKING RTIELEIIPE VDLYKCEPWD LPDKSFLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVNS NRRAVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLTDSVCGS PSSSLKDSYA LCRIFKKTIQ IPKNNKEEKT IGNTLLNRNI 180 LGKDNSTGIN EGEASRGIEA DQDYENYSNP DYPKFLSDTS SSDLTQGTPT ETGIADDLQA 240 PFASDEANSS ANLYSLGAHG SSDNLFQDTY MPNDTSFQNY QFPYPPLELE DFPMINLAVE 300 MNTLKPQIMD DYISCDKLKD YMNGTLEEIF SLCSSQENNH VALPMQD
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-57 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-57 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-57 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-57 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-57 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_B | 1e-57 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_C | 1e-57 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_D | 1e-57 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_A | 1e-57 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_B | 1e-57 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_C | 1e-57 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_D | 1e-57 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
4dul_A | 1e-57 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
4dul_B | 1e-57 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
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