PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000026.1.g00011.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 431aa    MW: 47251.9 Da    PI: 5.0146
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000026.1.g00011.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.11e-14252308359
                                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                                     ++kr rr+ +NRe+ArrsR+RK+a + eLe+ + +L  eN++L k+l  +++++ + 
  FANhyb_rscf00000026.1.g00011.1 252 DVKRVRRMLSNRESARRSRRRKQAHLTELETQAVQLRVENSSLLKRLADINQKYNEA 308
                                     579********************************************9999998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.2E-11249306No hitNo description
SMARTSM003383.1E-19250314IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.243252307IPR004827Basic-leucine zipper domain
PfamPF001702.2E-12253306IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.29E-10254304No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
PfamPF124985.2E-32321428IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MDRVFSSMEE ISDHLWSSSG KNENEDEDEL SKMNRSTSEW SFQRFLQQQQ GSVSPSSSSQ  60
QQQQQQQAQN NEVEEIKVNA TSMAFPNGPN HSNTSSSAAS FKAPNVPVDS EEYQAFLKTK  120
LDLACAAVAL SRVKRDEVLC WLVWCSVSLV VCVYLGSSVK AQDSASLADS GQQASDALQL  180
GSQASSQGAG NDLCRSYDKN ANAPFGIPAL PTIRNRSAVP IRQATSGSSR ELSDDEEVEG  240
ETAMTENMDP TDVKRVRRML SNRESARRSR RRKQAHLTEL ETQAVQLRVE NSSLLKRLAD  300
INQKYNEAAV DNRVLKADIE TLRAKVKMAE ETVKRLTGSN PLFHTMSDVS SISMTPFDGS  360
PSETSTDAAV PVQDDPNHHC FQPSSNNSMP THDFRGNNGL ADNTPSVENA QQTSAETSTE  420
VAGNKMGRHL P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1266273RRSRRRKQ
2268273SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004302051.10.0PREDICTED: light-inducible protein CPRF2
SwissprotQ990901e-108CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2P6R5Y50.0A0A2P6R5Y5_ROSCH; Putative transcription factor bZIP family
STRINGXP_004302051.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.23e-64bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]