|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
FANhyb_rscf00000025.1.g00003.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
|
Family |
MYB_related |
Protein Properties |
Length: 332aa MW: 35584.9 Da PI: 10.4917 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00000025.1.g00003.1 | genome | kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 42.8 | 1.2e-13 | 95 | 139 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
FANhyb_rscf00000025.1.g00003.1 95 AWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 139
7*******************************************9 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009651 | Biological Process | response to salt stress |
GO:0009723 | Biological Process | response to ethylene |
GO:0009733 | Biological Process | response to auxin |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0009739 | Biological Process | response to gibberellin |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0031540 | Biological Process | regulation of anthocyanin biosynthetic process |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0080167 | Biological Process | response to karrikin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003682 | Molecular Function | chromatin binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MSRTCSQCGN NGHNSRTCTE AAGGGAASPA ENGIMLFGVR LVTEQGNAFR KSASMNNLSQ 60 YDQLPLQDSN PDAGYASDDV VHASGNRRER KRGVAWTEEE HRLFLLGLQK VGKGDWRGIS 120 RNFVKTRTPT QVASHAQKYF LRRSNHNRRR RRSSLFDITT DTPVIHEFID GRRSSTAPRR 180 KCTIITTGTA ISSTAVDQLG GNLIGGFPIS TFPMTLSPVV LPVTGESSSS AESTLALLGG 240 APNPSNDVQQ MVKGATTTRK VVRPIPVPPS AKMAELNLNN KYSPSRVAQE PLPLSLKLSN 300 TASSEEQSPT ASGHSSAFQA MSSGTDSIIS VA
|