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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
FANhyb_rscf00000004.1.g00006.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family |
HD-ZIP |
Protein Properties |
Length: 140aa MW: 15898.7 Da PI: 5.8333 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_rscf00000004.1.g00006.1 | genome | kazusa | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 56.7 | 4e-18 | 59 | 111 | 2 | 54 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54
rk+ ++tkeq + Lee F+++++++ +++e LA +l+L rqV vWFqNrRa
FANhyb_rscf00000004.1.g00006.1 59 RKKLRLTKEQSRLLEESFRQHHTLNPRQKEALAFQLKLRPRQVEVWFQNRRAS 111
78889**********************************************95 PP
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2 | HD-ZIP_I/II | 79.3 | 6.1e-26 | 59 | 124 | 1 | 65 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtk.tkqlEkdyea 65
+kk+rl+keq++lLEesF+++++L+p++K++la +L+l+prqv+vWFqnrRA +k+l ++ ea
FANhyb_rscf00000004.1.g00006.1 59 RKKLRLTKEQSRLLEESFRQHHTLNPRQKEALAFQLKLRPRQVEVWFQNRRASCNaSKNLQEQAEA 124
69**************************************************87625666666555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 140 aa
Download sequence Send
to blast |
MASLELTMSV PGFSSYPSIP SSVRDLDINQ IPSAGQGADQ EELLEDEEDS SNGSGGRPRK 60 KLRLTKEQSR LLEESFRQHH TLNPRQKEAL AFQLKLRPRQ VEVWFQNRRA SCNASKNLQE 120 QAEANRDGMR VSEEMVRVTD
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
UniProt | Probable transcription repressor that binds to the DNA sequence 5'-CAAT[GC]ATTG-3'. {ECO:0000269|PubMed:10732669}. |