PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon19559383_s.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 69aa    MW: 8215.3 Da    PI: 4.2466
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon19559383_s.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM34.37.1e-111264151
                               NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpkkv 51
                                      l pG+rF P +eelv  yL++kv+g++++ e+  i + d+y k +Pw++ +++
  FANhyb_icon19559383_s.1.g00001.1 12 LLPGYRFCPMEEELVLSYLCPKVKGEEVPGEDYlIFNSDLYgKNDPWEIWNMY 64
                                      579************************999888899999994569***96433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.14E-101067IPR003441NAC domain
PROSITE profilePS5100513.2231269IPR003441NAC domain
PfamPF023651.0E-51458IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
MEIHEDGSES PLLPGYRFCP MEEELVLSYL CPKVKGEEVP GEDYLIFNSD LYGKNDPWEI  60
WNMYKERRK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011460797.18e-40PREDICTED: NAC domain-containing protein 48-like
TrEMBLA0A2P6PFM03e-16A0A2P6PFM0_ROSCH; Putative transcription factor NAM family
STRINGXP_004306296.16e-17(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-08NAC domain containing protein 32