|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
FANhyb_icon19146025_s.1.g00001.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
|
Family |
NAC |
Protein Properties |
Length: 95aa MW: 10999.7 Da PI: 10.1889 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
FANhyb_icon19146025_s.1.g00001.1 | genome | kazusa | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 109.4 | 4.1e-34 | 1 | 90 | 40 | 128 |
NAM 40 ykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapk 115
yk++Pw+Lp k+ +++ewyfF++rd+ky++g+r+nra+ gyWkatg+dk++ls+ +++ +g+kk Lvfy+g+ pk
FANhyb_icon19146025_s.1.g00001.1 1 YKYNPWELPPKALFGKEEWYFFTPRDRKYPNGTRPNRAAGLGYWKATGTDKHILSScGTKSIGVKKALVFYTGHPPK 77
799*****966667899**************************************988889**************** PP
NAM 116 gektdWvmheyrl 128
g+kt+W+m+eyrl
FANhyb_icon19146025_s.1.g00001.1 78 GVKTEWIMNEYRL 90
***********97 PP
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 4e-42 | 1 | 92 | 58 | 147 | NAC domain-containing protein 19 |
3swm_B | 4e-42 | 1 | 92 | 58 | 147 | NAC domain-containing protein 19 |
3swm_C | 4e-42 | 1 | 92 | 58 | 147 | NAC domain-containing protein 19 |
3swm_D | 4e-42 | 1 | 92 | 58 | 147 | NAC domain-containing protein 19 |
3swp_A | 4e-42 | 1 | 92 | 58 | 147 | NAC domain-containing protein 19 |
3swp_B | 4e-42 | 1 | 92 | 58 | 147 | NAC domain-containing protein 19 |
3swp_C | 4e-42 | 1 | 92 | 58 | 147 | NAC domain-containing protein 19 |
3swp_D | 4e-42 | 1 | 92 | 58 | 147 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor of the NAC family (Probable). Together with NAC018/NARS2, regulates embryogenesis by regulating the development and degeneration of ovule integuments, a process required for intertissue communication between the embryo and the maternal integument (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By Jasmonic acid (JA). {ECO:0000269|PubMed:16805732}. |