PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon18029521_s.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

MYB_related

Protein Properties

Length: 35aa MW: 4147.85 Da PI: 8.2471

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon18029521_s.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.2	5.2e-10	5	32	1	28
TSSS-HHHHHHHHHHHHHTTTT-HHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIa 28 +g+WT+eEd ll ++++ +G g+W++I+ FANhyb_icon18029521_s.1.g00001.1 5 KGAWTKEEDCLLRNCIEIHGEGRWHKIP 32 79*************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	17.379	1	35	IPR017930	Myb domain
SuperFamily	SSF46689	8.61E-9	2	32	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.2E-11	2	33	IPR009057	Homeodomain-like
Pfam	PF00249	3.7E-8	5	32	IPR001005	SANT/Myb domain
CDD	cd00167	7.05E-6	7	31	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 35 aa Download sequence Send to blast
MEVRKGAWTK EEDCLLRNCI EIHGEGRWHK IPLKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66380.1	2e-12	myb domain protein 114