PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon17979771_o.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 76aa    MW: 8139.83 Da    PI: 5.7621
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon17979771_o.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.27.1e-126342856
                               AP2 28 rkrfslgkfgtaeeAakaaiaarkklege 56
                                      r r +lg+++t+eeAa+a+++a+++l+ge
  FANhyb_icon17979771_o.1.g00001.1  6 RVRLWLGTYDTPEEAARAYDEAARALRGE 34
                                      5899***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103213.525141IPR001471AP2/ERF domain
SMARTSM003808.4E-11147IPR001471AP2/ERF domain
CDDcd000181.94E-18242No hitNo description
Gene3DG3DSA:3.30.730.103.9E-18341IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-13541IPR016177DNA-binding domain
PfamPF008476.1E-8534IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
KDSSQRVRLW LGTYDTPEEA ARAYDEAARA LRGENARTNF AAPAANPDSN SSLLANSCPN  60
PNGTFMPSCL SDGRHG
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004297883.16e-46PREDICTED: uncharacterized protein LOC101294553
SwissprotQ6J9S14e-14RA211_ARATH; Ethylene-responsive transcription factor RAP2-11
TrEMBLA0A3Q8TCZ62e-47A0A3Q8TCZ6_FRAAN; Transcription factor ERF44
STRINGXP_004297883.12e-45(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83243143
Publications ? help Back to Top
  1. Meng S, et al.
    Arabidopsis NRT1.5 Mediates the Suppression of Nitrate Starvation-Induced Leaf Senescence by Modulating Foliar Potassium Level.
    Mol Plant, 2016. 9(3): p. 461-470
    [PMID:26732494]