PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon16706045_s.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 62aa    MW: 7047.96 Da    PI: 10.5496
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon16706045_s.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.39.9e-096545595
                               NAM 55 ekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlsk 95
                                      + ewyfFs+   k++++krk+++        +++g Wk++g+d++++ +
  FANhyb_icon16706045_s.1.g00001.1  6 DMEWYFFSPIVLKHSNSKRKSKSkstkinrtIDEGSWKKQGNDRRITGA 54
                                      679****98777777555444422333333388*************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100512.791162IPR003441NAC domain
SuperFamilySSF1019413.14E-7561IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 62 aa     Download sequence    Send to blast
MADSPDMEWY FFSPIVLKHS NSKRKSKSKS TKINRTIDEG SWKKQGNDRR ITGACSDKQI  60
GG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011469603.15e-29PREDICTED: NAC domain-containing protein 68-like
TrEMBLA0A2P6SC502e-20A0A2P6SC50_ROSCH; Putative transcription factor NAM family
STRINGXP_004307326.13e-28(Fragaria vesca)