PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00035228_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 128aa    MW: 14180.9 Da    PI: 10.7198
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00035228_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.23.5e-1772115249
                               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 
                                        ++GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a
  FANhyb_icon00035228_a.1.g00001.1  72 TFRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVA 115
                                       59****998.**********843...6******************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.2E-2572118IPR001471AP2/ERF domain
PROSITE profilePS5103218.76972128IPR001471AP2/ERF domain
SMARTSM003802.9E-2272128IPR001471AP2/ERF domain
PfamPF008472.1E-1172115IPR001471AP2/ERF domain
SuperFamilySSF541715.95E-1772118IPR016177DNA-binding domain
PRINTSPR003672.4E-107384IPR001471AP2/ERF domain
CDDcd000185.92E-2373115No hitNo description
PRINTSPR003672.4E-1095111IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    Send to blast
GRGASMIMAM EPSTRPFEEY ECGLGANGCL KSVSRGRNQA GQEDNNGSNN EPNTKKRQRS  60
INDHGDGGKH PTFRGVRMRS WGKWVSEIRE PRKKSRIWLG TYPTAEMAAR AHDVATRSTN  120
AFLGQMGV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004307005.13e-48PREDICTED: ethylene-responsive transcription factor ERF034-like
TrEMBLA0A3Q8TBF36e-47A0A3Q8TBF3_FRAAN; Transcription factor ERF21
STRINGXP_004307005.11e-47(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19234263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.16e-31ERF family protein