PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00034378_a.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family NAC
Protein Properties Length: 25aa    MW: 2943.33 Da    PI: 4.6576
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00034378_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM29.71.9e-09725119
                               NAM  1 lppGfrFhPtdeelvveyL 19
                                      lp+GfrFhPtdeelv++yL
  FANhyb_icon00034378_a.1.g00001.1  7 LPAGFRFHPTDEELVNHYL 25
                                      79****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-9325IPR003441NAC domain
PROSITE profilePS5100514.465725IPR003441NAC domain
PfamPF023651.6E-6825IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 25 aa     Download sequence    Send to blast
MKAELDLPAG FRFHPTDEEL VNHYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.15e-11NAC domain containing protein 102