PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_icon00020451_a.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family MYB_related
Protein Properties Length: 74aa    MW: 8188.24 Da    PI: 8.5098
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_icon00020451_a.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.81.4e-091546132
                                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
                   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                                      +g+WT+ Ed+ l d+vkq G g W + +r+ g
  FANhyb_icon00020451_a.1.g00001.1 15 KGAWTAHEDQVLRDYVKQNGEGKWGKMSRETG 46
                                      79**************************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.9E-10744IPR009057Homeodomain-like
PROSITE profilePS500906.6791043IPR017877Myb-like domain
SuperFamilySSF466891.72E-71046IPR009057Homeodomain-like
PfamPF002497.6E-61546IPR001005SANT/Myb domain
CDDcd001677.26E-51746No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    Send to blast
MGRSSSRCDK EGANKGAWTA HEDQVLRDYV KQNGEGKWGK MSRETGENSL SVISTMNTAS  60
FSSMKMAEQL LIVM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004303467.11e-25PREDICTED: transcription factor WER-like
TrEMBLA0A2P6Q1G24e-23A0A2P6Q1G2_ROSCH; Putative transcription factor MYB-HB-like family
TrEMBLD6PT027e-23D6PT02_ROSRU; Putative MYB transcription factor
TrEMBLF2QKW34e-23F2QKW3_ROSRU; Putative MYB transcription factor
STRINGXP_004303467.14e-25(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2200323
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.12e-11myb domain protein 3