PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00018154_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | NAC | ||||||||
Protein Properties | Length: 55aa MW: 6358.25 Da PI: 7.5135 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43.4 | 1.1e-13 | 8 | 55 | 1 | 48 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48 lp+G+rF+P+de l+++yL+kk ++++ e++ vi+e+d++k+eP+ Lp FANhyb_icon00018154_a.1.g00001.1 8 LPKGCRFQPSDEVLLSHYLQKKNQRQDPEITAVIPEIDVTKHEPRYLP 55 799***************************999************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.15E-12 | 3 | 55 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 16.266 | 8 | 55 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-5 | 9 | 45 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 55 aa Download sequence Send to blast |
MSYGGFSLPK GCRFQPSDEV LLSHYLQKKN QRQDPEITAV IPEIDVTKHE PRYLP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011468877.1 | 2e-30 | PREDICTED: NAC domain-containing protein 4-like isoform X2 | ||||
TrEMBL | A0A2P6SIY7 | 4e-19 | A0A2P6SIY7_ROSCH; Putative transcription factor NAM family | ||||
STRING | XP_004308753.1 | 4e-25 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF16106 | 4 | 10 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 1e-10 | NAC 014 |