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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00017764_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | bHLH | ||||||||
Protein Properties | Length: 82aa MW: 9537.18 Da PI: 10.4847 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.6 | 1.4e-05 | 56 | 79 | 1 | 24 |
CHHHHHHHHHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLr 24 r++ + rE+ RRd++N+ f eL FANhyb_icon00017764_a.1.g00001.1 56 RKVQKADREKLRRDKLNEHFLELG 79 5778899**************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 9.74E-5 | 53 | 81 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 8.842 | 55 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 82 aa Download sequence Send to blast |
MDQWKGDHFA GVSAPSSAQH LPLPPVNCDR FVILFELIVI LGKGLMWRPR TQFLLRKVQK 60 ADREKLRRDK LNEHFLELGN TL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004287813.1 | 1e-29 | PREDICTED: transcription factor bHLH121 | ||||
TrEMBL | A0A2P6RLY4 | 2e-16 | A0A2P6RLY4_ROSCH; Putative transcription factor bHLH family | ||||
STRING | XP_004287813.1 | 4e-29 | (Fragaria vesca) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19860.1 | 3e-09 | bHLH family protein |