PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_icon00011879_a.1.g00001.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

FAR1

Protein Properties

Length: 147aa MW: 17225.3 Da PI: 4.9981

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_icon00011879_a.1.g00001.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.2	2.3e-17	78	146	1	69
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvk 69 +fYn+YA+ vGFs+r+s+ +k k ++ i++r fvCs egkr+ ek++ + + +raetr +C aklk+k FANhyb_icon00011879_a.1.g00001.1 78 EFYNAYAYGVGFSIRRSRFHKDKSDK-IIDRLFVCSAEGKRDCEKDTrYQYVKAHRAETRFECVAKLKIK 146 6***************99996666.***********9999844556779***********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.3E-14	78	146	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence Send to blast
MDTENSCEEV LIQANSRRKL DFLDGIDLNT SAEDDSAEEK EFEPVEGNEK VDYVHFKVRK 60 ELIPVIGMEF DTEKDAYEFY NAYAYGVGFS IRRSRFHKDK SDKIIDRLFV CSAEGKRDCE 120 KDTRYQYVKA HRAETRFECV AKLKIKL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024164436.1	1e-67	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2P6PSC3	3e-33	A0A2P6PSC3_ROSCH; Putative transcription factor FAR family
STRING	XP_008240644.1	3e-35	(Prunus mume)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-13	FAR1 family protein