PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00011092_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | WRKY | ||||||||
Protein Properties | Length: 177aa MW: 19487.9 Da PI: 8.0743 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 54.1 | 3e-17 | 12 | 49 | 22 | 59 |
EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 rsYYrCt ++C vkk+vers+edp++v++tYeg+H h+ FANhyb_icon00011092_a.1.g00001.1 12 RSYYRCTNSKCIVKKRVERSSEDPTTVITTYEGQHCHH 49 9**********************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 4.8E-8 | 9 | 50 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.83E-13 | 10 | 49 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.7E-12 | 11 | 49 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.4E-15 | 11 | 50 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 16.306 | 12 | 51 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence Send to blast |
MNINLFVPLW RRSYYRCTNS KCIVKKRVER SSEDPTTVIT TYEGQHCHHT VTFPRGSGGG 60 GGVNIISHDQ SGFATGSHHQ LMHQLMQLPP VSQFMHFPTS IQPRSQISPT HNLTVGRSQS 120 HRLVPAGGTH HHYDEAAGGS QCITNQNHEP LPVVPVPTDE GLLGDIVPPG MRNPFDG |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004297258.1 | 1e-103 | PREDICTED: probable WRKY transcription factor 57 isoform X1 | ||||
Refseq | XP_011463029.1 | 1e-103 | PREDICTED: probable WRKY transcription factor 57 isoform X2 | ||||
TrEMBL | A0A2P6R2N9 | 1e-95 | A0A2P6R2N9_ROSCH; Putative transcription factor WRKY family | ||||
STRING | XP_004297258.1 | 1e-102 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10814 | 31 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 3e-23 | WRKY DNA-binding protein 57 |