PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00009472_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | MYB_related | ||||||||
Protein Properties | Length: 57aa MW: 6179.21 Da PI: 10.2159 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.1 | 3.5e-12 | 15 | 46 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd +l+++++ +G ++Wkt+a+ g FANhyb_icon00009472_a.1.g00001.1 15 KGAWTAEEDRKLAEYIEIHGAKRWKTVASIAG 46 79**************************9877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 8.5E-11 | 9 | 43 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 12.019 | 10 | 57 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 6.53E-9 | 12 | 46 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 6.3E-10 | 15 | 46 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.29E-7 | 17 | 43 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 57 aa Download sequence Send to blast |
MAPKNDGSTK KVMNKGAWTA EEDRKLAEYI EIHGAKRWKT VASIAGLVLS PSLLGLP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011464394.1 | 2e-25 | PREDICTED: transcription factor WER-like isoform X2 | ||||
Refseq | XP_024169376.1 | 2e-25 | transcription factor WER-like | ||||
TrEMBL | A0A2P6P8K4 | 4e-24 | A0A2P6P8K4_ROSCH; Putative transcription factor MYB-HB-like family | ||||
STRING | XP_004299414.1 | 7e-25 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF32766 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13480.1 | 3e-09 | myb domain protein 79 |