PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_icon00007002_a.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | WRKY | ||||||||
Protein Properties | Length: 51aa MW: 5617.24 Da PI: 4.7427 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 25.6 | 2.4e-08 | 31 | 51 | 1 | 21 |
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ++Dg +WrKYGqKe+ ++++p FANhyb_icon00007002_a.1.g00001.1 31 VEDGQAWRKYGQKEILNAPYP 51 58***************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.0E-7 | 25 | 51 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 9.408 | 26 | 51 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 9.15E-7 | 28 | 51 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.7E-5 | 32 | 51 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 51 aa Download sequence Send to blast |
MDSITDQASL IKATSILGKN SESWTTVSST VEDGQAWRKY GQKEILNAPY P |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004307738.1 | 4e-14 | PREDICTED: probable WRKY transcription factor 70 | ||||
STRING | XP_004307738.1 | 2e-13 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4700 | 30 | 56 |