PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02229.2.p
Common NameEUGRSUZ_K02229
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 217aa    MW: 24010.2 Da    PI: 8.5112
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02229.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.12.8e-07174200430
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
               HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                       +h+ +Er RR++iN+++  L++++P +
  Eucgr.K02229.2.p 174 SHSLAERVRRSKINERLRCLQDIVPGC 200
                       8************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.47E-5168204No hitNo description
SuperFamilySSF474599.16E-8168202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.033170216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.2E-8173202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-4174200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MAEFTSEFLQ CLKASSFPFM DTDPSMELLS HHFREMNPTV VMDHSSLTFH ENPMDGFCSE  60
SLFPHQAPDC PGNLAVSVPG FSHPQEPNCE SDSVVQTVLT GNGEPHKKRK ALDVSQSSSA  120
NSSAPAPLDT GRKKKHSSSS SGRGKRIKGS NEKVEERPKE VVHVRARRGQ ATDSHSLAER  180
VRRSKINERL RCLQDIVPGC YKVQICFKKL QLMNAF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02229.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036900.11e-149PREDICTED: transcription factor BEE 3
TrEMBLA0A059A4231e-159A0A059A423_EUCGR; Uncharacterized protein
STRINGXP_010036900.11e-148(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.11e-24bHLH family protein