PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K02136.1.p
Common NameEUGRSUZ_K02136, LOC104425711
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 231aa    MW: 25832.1 Da    PI: 9.4929
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K02136.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.32.2e-09108149351
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                        +GV++  k+ +W A I++      +k+++lg+    e+Aa+++++a+ 
  Eucgr.K02136.1.p 108 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVSCQEDAARLYDRAAF 149
                       79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.0E-4107164IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-7108152IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.9E-6110154IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MVSLRRRKLL GLCSGKASFL APLPKSSDGH ANDTPNQNAK LVTVHPLPLD DVKPPEEKIL  60
AKLGSMSSNI SGSSSSKEPH NQDFSGQAIK RRKRHRRKHH HNQEPCLMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVSCQEDA ARLYDRAAFM CGREPNFELS EEEKQELAKL SWDEFLARTR  180
HAITNKKHKR RVGAGSEKKS EPEPENGDWD GEEANSLSGS EEVEPDTSVS *
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K02136.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036790.11e-171PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010036791.11e-171PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010036792.11e-171PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_010036793.11e-171PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A059A3Z81e-170A0A059A3Z8_EUCGR; Uncharacterized protein
STRINGXP_010036790.11e-171(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61892646
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.13e-48ERF family protein