PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K01151.1.p
Common NameEUGRSUZ_K01151
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 278aa    MW: 29911.9 Da    PI: 5.2384
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K01151.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.11e-2974132259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ +tY+++Hnh 
  Eucgr.K01151.1.p  74 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRLDPTTLLVTYSSDHNHA 132
                       69*************************998****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.9E-3165134IPR003657WRKY domain
SuperFamilySSF1182901.57E-2569134IPR003657WRKY domain
SMARTSM007745.2E-3573133IPR003657WRKY domain
PROSITE profilePS5081131.86974134IPR003657WRKY domain
PfamPF031066.7E-2575131IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MDRRFYTNPF VHDQEEDPEP EQGPDSPSSG DDSKVNASEP SQKRRKSVKK RVVSVPIAGD  60
PEGSKSKGEA YPPSDSWAWR KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ VERSRLDPTT  120
LLVTYSSDHN HAVPSSSSSK NHHHLRAAAV SDSSASASAS ASASAADPDD CISAMFEPDE  180
LAGFIGGATL LDPGFDWLAD VASTSSFLQR PVYEGGGAEA APVHRMRDEE EGEDPLFADL  240
GELPECSLVF RQTKLLEPEG ESRRRGLSAV PCVGNVV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B9e-1950135680Disease resistance protein RRS1
5w3x_D9e-1950135680Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K01151.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018720196.10.0PREDICTED: probable WRKY transcription factor 69 isoform X2
TrEMBLA0A059A2140.0A0A059A214_EUCGR; Uncharacterized protein
STRINGXP_010035877.11e-130(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM124781930
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.24e-50WRKY DNA-binding protein 69