PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.K00183.1.p

Common Name

EUGRSUZ_K00183

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

Trihelix

Protein Properties

Length: 1009aa MW: 110744 Da PI: 7.0869

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.K00183.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.8	3.1e-09	215	274	21	81
trihelix 21 lrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 +rgk ++ + +ev++++ ++g++r +k+ kw+n+ ++++k+ e+e++++ e++ +y Eucgr.K00183.1.p 215 PGRGKTRAEKDREVAEFLNRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQV-GKSY 274 56889999999**************************************9965555.3445 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.510.10	7.6E-6	833	950	No hit	No description
SuperFamily	SSF56112	1.48E-15	843	993	IPR011009	Protein kinase-like domain
CDD	cd00180	5.87E-13	854	989	No hit	No description
Gene3D	G3DSA:1.10.510.10	8.4E-4	959	994	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 1009 aa Download sequence Send to blast
MADNKGAGDT PKKPQQPPPP PPPQISASPT EETTPTDPRP PPPPSPAVVV TGATPFISAP 60 FFDQHHSQFE AVSGTNPKRP RFGVGQWKLL TSPPESSPSP TTHPNPNPQA HATTASSSDT 120 ASSPTQSPIT SVPTTTSSQE TSKLEGGGDQ QQFQTHHQFR KGKYVSPVWK PNEMLWLARA 180 WRVQYQGGGG GGSSSDSRID QNPAAGGGDG AAAAPGRGKT RAEKDREVAE FLNRHGVNRD 240 AKTAGTKWDN MLGEFRKVYE WERGGEREQV GKSYFRLSPY ERKVYRLPAS FDEEVFEELA 300 QFMGPRMRTT GQSRVSPVFA DDSGGIVRAL PPPPPPYRDD DPSLLTARTK QLVMSSGVEA 360 SSYYVSRGGG GGGGGGGLFL GFEPSPLDVG SGPSASSALR EMRRIGKIRM TWEESVSLWA 420 EEGEHHRGRV RLQGSSFLNA DELTFFDDSM VACTMEAFED GALRGFSVDR FIPGQQVKVF 480 GRRKSSSSSV SASSTASGFQ ERVQLPLPEP SLRTIPPWEL QDPTEYYIGC LRVPPTTLPT 540 LFELSWYLQE PPPEELRLPL RRDVYRDLPP GKELFFTTSH ELLDSRSFTM DILSSIIRTN 600 PSLTSSTATS RDSYIGLWDD CLNRIVSKFC SVEMVMIRKP SVATAEVALQ DQWPNLTGFV 660 RNFCLWRGEE TDQVREGQLD PSSSIIEKLM WTYMDLPYIL GYFAVGHTVT FCALSRSQDA 720 RVVRTDLYKL DLSSQADRLK ALVPCYRVAG LLSLLADRCF DNMNANVVNY KNSIFPYSDF 780 ERINLGNGNV VEMTPNMVTR FFSSKRKWIA VKEIYDFLDH RVPHAEFICR SSEKDLALVF 840 KPRGCKSKPA NCEQLVEALM YVTKALVALH DLSFMHRHLS WDKVMRRSDG EGEWFICGFD 900 DATGAPQINP HGGSGGAGGG GEARGPHAPE MVGRGLHGVK VDVWGVGYLV KTCGLTSSGL 960 PKMLRDLQSR CLDPNPEHRP TAADCYHHLL QLQSSLSAAG GGGTGGGY*

Sequence ? help Back to Top

Protein Sequence Length: 1009 aa Download sequence Send to blast

MADNKGAGDT PKKPQQPPPP PPPQISASPT EETTPTDPRP PPPPSPAVVV TGATPFISAP  60
FFDQHHSQFE AVSGTNPKRP RFGVGQWKLL TSPPESSPSP TTHPNPNPQA HATTASSSDT  120
ASSPTQSPIT SVPTTTSSQE TSKLEGGGDQ QQFQTHHQFR KGKYVSPVWK PNEMLWLARA  180
WRVQYQGGGG GGSSSDSRID QNPAAGGGDG AAAAPGRGKT RAEKDREVAE FLNRHGVNRD  240
AKTAGTKWDN MLGEFRKVYE WERGGEREQV GKSYFRLSPY ERKVYRLPAS FDEEVFEELA  300
QFMGPRMRTT GQSRVSPVFA DDSGGIVRAL PPPPPPYRDD DPSLLTARTK QLVMSSGVEA  360
SSYYVSRGGG GGGGGGGLFL GFEPSPLDVG SGPSASSALR EMRRIGKIRM TWEESVSLWA  420
EEGEHHRGRV RLQGSSFLNA DELTFFDDSM VACTMEAFED GALRGFSVDR FIPGQQVKVF  480
GRRKSSSSSV SASSTASGFQ ERVQLPLPEP SLRTIPPWEL QDPTEYYIGC LRVPPTTLPT  540
LFELSWYLQE PPPEELRLPL RRDVYRDLPP GKELFFTTSH ELLDSRSFTM DILSSIIRTN  600
PSLTSSTATS RDSYIGLWDD CLNRIVSKFC SVEMVMIRKP SVATAEVALQ DQWPNLTGFV  660
RNFCLWRGEE TDQVREGQLD PSSSIIEKLM WTYMDLPYIL GYFAVGHTVT FCALSRSQDA  720
RVVRTDLYKL DLSSQADRLK ALVPCYRVAG LLSLLADRCF DNMNANVVNY KNSIFPYSDF  780
ERINLGNGNV VEMTPNMVTR FFSSKRKWIA VKEIYDFLDH RVPHAEFICR SSEKDLALVF  840
KPRGCKSKPA NCEQLVEALM YVTKALVALH DLSFMHRHLS WDKVMRRSDG EGEWFICGFD  900
DATGAPQINP HGGSGGAGGG GEARGPHAPE MVGRGLHGVK VDVWGVGYLV KTCGLTSSGL  960
PKMLRDLQSR CLDPNPEHRP TAADCYHHLL QLQSSLSAAG GGGTGGGY*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.K00183.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018720288.1	0.0	PREDICTED: uncharacterized protein LOC104426950
TrEMBL	A0A058ZY72	0.0	A0A058ZY72_EUCGR; Uncharacterized protein
STRING	XP_010038420.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM8356	16	24

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	2e-07	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Eucgr.K00183.1.p