PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.K00181.1.p
Common NameEUGRSUZ_K00181
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 142aa    MW: 15508.5 Da    PI: 7.5065
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.K00181.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH192.6e-061381655
                      HHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH 16 iNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                      +N+ ++ Lr+llP       ++K   ++  + Av+YI++L+
  Eucgr.K00181.1.p  1 MNTLYASLRSLLPVeY---IKGKRATSDHITGAVNYINHLE 38
                      8*************77...9*******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.096137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-7156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-5155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.20E-5141No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MNTLYASLRS LLPVEYIKGK RATSDHITGA VNYINHLERN INEMGRRRDE LKRGKSVCLG  60
SPGPEVWSSG TNSSTTALSV RPCLDGVEIV IRSASSSDQD HNFPLSKVLQ LLLEEGISVA  120
SCVSTRTSET IFIHTIQSEV Y*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.K00181.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010035053.11e-96PREDICTED: transcription factor bHLH118
TrEMBLA0A058ZXY65e-99A0A058ZXY6_EUCGR; Uncharacterized protein
STRINGXP_010035053.16e-96(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM29682767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25400.11e-31bHLH family protein