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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.J02994.1.p | ||||||||
Common Name | EUGRSUZ_J02994, LOC104423121 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Trihelix | ||||||||
Protein Properties | Length: 405aa MW: 45959.8 Da PI: 4.2974 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 48 | 3.3e-15 | 169 | 253 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L++a e+ + +r++l+ W+ev++k++e ++ r+ qC+++++ l+k+ykk+k+ + t + ss+++yf++++ Eucgr.J02994.1.p 169 WTEHETFVLLDAWGERFLQRGRKSLRSDEWQEVAEKVAEvSKVDRTESQCRNRLDTLKKKYKKEKAKFVE-TGGLSSKWVYFKKMD 253 *************************************762678************************998.577888********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 1.0E-21 | 168 | 255 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 8.6E-4 | 169 | 233 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 6.47 | 169 | 226 | IPR017877 | Myb-like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence Send to blast |
MDHAEDDAGY PPNSHGANQS QEYGSSNSQK LPGGTPPYPK PVSNQFVDDE DEDDGDEEDE 60 EEELGDEEDD KDQMNGNRQT VKNVEDEDDD DEDNDEDDFS DDDDDDDDDQ QKNQARRAND 120 PERRPKRRKL KSLVSSYEFA PRVPPPQDVP PPVAKPLPPT GGRNSLMDWT EHETFVLLDA 180 WGERFLQRGR KSLRSDEWQE VAEKVAEVSK VDRTESQCRN RLDTLKKKYK KEKAKFVETG 240 GLSSKWVYFK KMDMLMSSSP SQQTALSCGV DSGEYVFMNP RVYLNRANGM DEMRDSPGNS 300 ESSDKEGDDS DGLPPKKRKS GRESSDGASI KLLAESVTKF SKIYEKIENS KRQQMVELEK 360 MRMDFQRDLE VQRKQIMERA QAEIARIRQG DDGENDLSTE NASG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 115 | 129 | RRANDPERRPKRRKL |
2 | 122 | 129 | RRPKRRKL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.J02994.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010033886.1 | 0.0 | PREDICTED: trihelix transcription factor ASIL2 | ||||
TrEMBL | A0A059AJ02 | 0.0 | A0A059AJ02_EUCGR; Uncharacterized protein | ||||
STRING | XP_010033886.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM15605 | 9 | 16 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 2e-69 | Trihelix family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.J02994.1.p |
Entrez Gene | 104423121 |