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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Eucgr.J00680.1.p |
Common Name | EUGRSUZ_J00680 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family |
HSF |
Protein Properties |
Length: 303aa MW: 34909.3 Da PI: 7.6273 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.J00680.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 113.6 | 1.3e-35 | 43 | 134 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94
Fl+k+y++++d+++++++sw e++ +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgFkk+ ++ weF++++F+kg k+ll
Eucgr.J00680.1.p 43 FLTKTYQLVDDPRTDHIVSWGEEEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKIVADR---------WEFANEYFRKGAKHLL 126
9****************************************************************999.........**************** PP
XXXXXXXX CS
HSF_DNA-bind 95 ekikrkks 102
++i+r+k+
Eucgr.J00680.1.p 127 CEIHRRKT 134
******97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042802 | Molecular Function | identical protein binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 303 aa
Download sequence Send
to blast |
METSSNGSRG CGSEEYEHHH HHHHPRHQAA LSVELQKAVP APFLTKTYQL VDDPRTDHIV 60 SWGEEEATFV VWRPPEFARD LLPNYFKHNN FSSFVRQLNT YGFKKIVADR WEFANEYFRK 120 GAKHLLCEIH RRKTPQHQSH DHTPPPPLPH FFQPVDENLC WPSADPPFPP QPKPLPHGDV 180 LAVLTEDNQR LRRKNLMLLS ELTHMKSLYN DIIYFIQNHV KPLPHDPANN HNDHLDSISV 240 PKLIELDSDQ EGDTCSRMAR LKKAGRSGEE AGRGSNFKLF GVSLSGKKRL HPEKIDRQEL 300 QL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE). |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK376881 | 2e-99 | AK376881.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3143C10. |