PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I02396.1.p
Common NameEUGRSUZ_I02396, LOC104419702
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 167aa    MW: 18057.2 Da    PI: 5.2092
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I02396.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.72.5e-133896563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                      ++ +r+++NRe+ArrsR RK++ +  L   v++L ++N + +  l+  ++++ + ++e+
  Eucgr.I02396.1.p 38 RKRKRMISNRESARRSRMRKQKHLGDLMAQVEQLRGQNAQIAHGLNVTTELYLNIEAEN 96
                      6789************************************9999999988888777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-163498IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.7143678IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-938110No hitNo description
SuperFamilySSF579594.34E-123890No hitNo description
PfamPF001701.0E-103890IPR004827Basic-leucine zipper domain
CDDcd147022.00E-183989No hitNo description
PROSITE patternPS0003604156IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MASSSTGASS GSSSLALQNS ASGSEGCAQE QNQIMDQRKR KRMISNRESA RRSRMRKQKH  60
LGDLMAQVEQ LRGQNAQIAH GLNVTTELYL NIEAENSILS AQAAELSNRL QSLNEIISYM  120
SSASLLFESD EQVPVLGGDD GFMNSWNASA AWMNPPAMAP ADILMY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13758RKRKRMISNRESARRSRMRKQK
25057RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I02396.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029747.11e-118PREDICTED: bZIP transcription factor 11
SwissprotC0Z2L51e-42BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A059AS721e-116A0A059AS72_EUCGR; Uncharacterized protein
STRINGXP_010029747.11e-117(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50128154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.13e-37basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]