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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Eucgr.I02255.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family |
HD-ZIP |
Protein Properties |
Length: 189aa MW: 21505.1 Da PI: 10.0166 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.I02255.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 53.2 | 5e-17 | 34 | 84 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqN Ra++k
Eucgr.I02255.1.p 34 RLSLEQVKALEKSFEIGNKLEPERKIQLARALGLQPRQIAIWFQNWRARWK 84
57889*********************************************9 PP
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2 | HD-ZIP_I/II | 113.7 | 1.1e-36 | 32 | 116 | 3 | 88 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88
k+rls eqvk+LE+sFe +kLeperK +lar+Lglqprq+a+WFqn RAR+ktkqlE+dye+Lk++++ ++++ne+L++e L+
Eucgr.I02255.1.p 32 KKRLSLEQVKALEKSFEIGNKLEPERKIQLARALGLQPRQIAIWFQNWRARWKTKQLERDYEVLKKQFE-VHAQNEKLHAELLVLK 116
89******************************************************************8.7889999*99988776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MSFSGADHNQ RSCGGGDDND LSDDGSQLLL GKKRLSLEQV KALEKSFEIG NKLEPERKIQ 60 LARALGLQPR QIAIWFQNWR ARWKTKQLER DYEVLKKQFE VHAQNEKLHA ELLVLKGRDT 120 NEAPSNLKKE IERSYWSNGS ENSSNINLDI SRTSVMNSPV SSSQFSNKHH FTSWRPSVMA 180 QQLHGSTR*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By auxin. {ECO:0000269|PubMed:12644682}. |