PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I02069.1.p
Common NameEUGRSUZ_I02069
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 456aa    MW: 49767.9 Da    PI: 6.2727
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I02069.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH55.97.8e-18174223255
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  Eucgr.I02069.1.p 174 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 223
                       899*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-19170243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.46172222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-22172243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-17174227No hitNo description
PfamPF000102.7E-15174223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-13178228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MGSWGHLTVP TPRKFGIHHH SHGEKEHHFK SGTFPPSLLP RAPLSLSLSL SLSFCLGVFH  60
GFPAWNGEVA SDGGSGDARL AAQFPGIPRP FAEVRRFLPG ILGLFRGGFG GAAEEMVRPA  120
AKTPHHHHHH EQHDDDDDEE TEYGDDFAPA HNSNSSFPKE EAGKGDGKRG SAPRSKHSET  180
EQRRRSKINE RFQILRDLIP QNDQKRDKAS FLLEVIEYIQ FLQEKLQMYE GSYPGYDQEP  240
SKLTPWRSNT GTVESQMDHL QIMKNGSAHE SRVVMNPLLA NAQNSLESDL GNAAVSIDMQ  300
TQPGMYASVG HGGVASEPLT EAVSNVGNVS GHPQSQLWQA MPFAADCSIP NNTHIDQEQF  360
TIESGSVSLS AAYSQGILNT LTQALQSSGV DLSQANISVQ IDVGKRANNR AAGTLSTSKD  420
HENVPPDSQA RMHDGSEVYG EEPDQAHKRL RTEKS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I02069.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010029419.10.0PREDICTED: transcription factor BIM2 isoform X1
TrEMBLA0A059ARC90.0A0A059ARC9_EUCGR; Uncharacterized protein
STRINGXP_010029419.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1716778
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.17e-63BES1-interacting Myc-like protein 2