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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Eucgr.I01334.1.p |
| Common Name | EUGRSUZ_I01334, LOC104418887 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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| Family |
BBR-BPC |
| Protein Properties |
Length: 315aa MW: 35273.3 Da PI: 10.2103 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Eucgr.I01334.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 316.2 | 1e-96 | 1 | 314 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkgyye.................paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkal 74
mdd g++ r+k y ++++l+ +++++m ++ e++++i+er+ a +++kaa+ +rd+af qr++al er+kal
Eucgr.I01334.1.p 1 MDDGGQHGnhRHKVEYPyklmhtlwnmapqhqmkEKNALA--MNQKIMNILREKEQAIQERKDAEAQTKAAIGARDEAFRQREEALVERDKAL 91
6777765446777744455888888888543331223333..899************************************************ PP
GAGA_bind 75 verdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpk...ekk 163
+erdn+ +al++ en++++++ + +g k +++ s ++++ + ++++a+pi++ + +a + ++ k+++++k +++
Eucgr.I01334.1.p 92 MERDNARAALQYWENAINFTM--VGGNQHGLKRVHHPPY-SPADIAE---AlNADVRITDAFPISSITADAIKPRQGKRSKEGKGIAskgSST 178
***************977655..3344456666666665.2233333...3345788899999999999988888777666665443000334 PP
GAGA_bind 164 akkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRia 256
++k k+ +e+ +v+ s+ ++++++++s d+ ln v ++ st+PvPvCsCtG++r CYkWGnGGWqS+CCttt+S+yPLP+ +++r+aR++
Eucgr.I01334.1.p 179 QRKGKRVGEDL--NVQVLSHAKKVRSKWDSADVCLNLVVFNGSTMPVPVCSCTGIPRHCYKWGNGGWQSSCCTTTLSMYPLPQIPHKRHARVS 269
44555544444..4444444488********************************************************************** PP
GAGA_bind 257 grKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
grKmS+++f+klL++LaaeG+dls p+DLkd+WAkHGtn+++ti+
Eucgr.I01334.1.p 270 GRKMSGSVFTKLLSRLAAEGHDLSIPLDLKDYWAKHGTNRYITIK 314
********************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MDDGGQHGNH RHKVEYPYKL MHTLWNMAPQ HQMKEKNALA MNQKIMNILR EKEQAIQERK 60
DAEAQTKAAI GARDEAFRQR EEALVERDKA LMERDNARAA LQYWENAINF TMVGGNQHGL 120
KRVHHPPYSP ADIAEALNAD VRITDAFPIS SITADAIKPR QGKRSKEGKG IASKGSSTQR 180
KGKRVGEDLN VQVLSHAKKV RSKWDSADVC LNLVVFNGST MPVPVCSCTG IPRHCYKWGN 240
GGWQSSCCTT TLSMYPLPQI PHKRHARVSG RKMSGSVFTK LLSRLAAEGH DLSIPLDLKD 300
YWAKHGTNRY ITIK*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. {ECO:0000269|PubMed:14731261}. |
