 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Eucgr.I00587.1.p |
| Common Name | EUGRSUZ_I00587, LOC104420303 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
| Family |
NAC |
| Protein Properties |
Length: 245aa MW: 27715 Da PI: 5.7122 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Eucgr.I00587.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 127.7 | 8.9e-40 | 5 | 136 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
p GfrF Pt+eel+++yL++++ g k el++vi+ +di+++ePw+Lp+ +++e+++w+fF++ ++++a+g r++r++++gyWkatg+
Eucgr.I00587.1.p 5 PTGFRFYPTEEELISFYLHNQLGGLKqDELHRVIPVLDIFNTEPWNLPQlageLCREEREQWFFFAPLQEREARGGRPSRSMATGYWKATGSL 97
89*********************9993445667***************656654445677********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++s++++++g+kk+++fy g++p+g+kt+W ++eyr+
Eucgr.I00587.1.p 98 GYIYSSDNKVIGVKKSMIFYMGKTPTGRKTHWKLNEYRA 136
*************************************96 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MEKYPTGFRF YPTEEELISF YLHNQLGGLK QDELHRVIPV LDIFNTEPWN LPQLAGELCR 60
EEREQWFFFA PLQEREARGG RPSRSMATGY WKATGSLGYI YSSDNKVIGV KKSMIFYMGK 120
TPTGRKTHWK LNEYRAIELS PTNLDSTSSN ISIPKLRREF ALCRVYVVSG RSRAFDRRQL 180
EAVSRETTIQ GSDNTASSEG GHEGGGCADA SSSEAVAANA GSSHQWEMAS LEDPIWDWEQ 240
LDWL*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-32 | 5 | 166 | 18 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-32 | 5 | 166 | 18 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-32 | 5 | 166 | 18 | 163 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-32 | 5 | 166 | 18 | 163 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-32 | 5 | 166 | 21 | 166 | NAC domain-containing protein 19 |
| 3swm_B | 5e-32 | 5 | 166 | 21 | 166 | NAC domain-containing protein 19 |
| 3swm_C | 5e-32 | 5 | 166 | 21 | 166 | NAC domain-containing protein 19 |
| 3swm_D | 5e-32 | 5 | 166 | 21 | 166 | NAC domain-containing protein 19 |
| 3swp_A | 5e-32 | 5 | 166 | 21 | 166 | NAC domain-containing protein 19 |
| 3swp_B | 5e-32 | 5 | 166 | 21 | 166 | NAC domain-containing protein 19 |
| 3swp_C | 5e-32 | 5 | 166 | 21 | 166 | NAC domain-containing protein 19 |
| 3swp_D | 5e-32 | 5 | 166 | 21 | 166 | NAC domain-containing protein 19 |
| 4dul_A | 5e-32 | 5 | 166 | 18 | 163 | NAC domain-containing protein 19 |
| 4dul_B | 5e-32 | 5 | 166 | 18 | 163 | NAC domain-containing protein 19 |
| Search in ModeBase |
