PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.I00291.1.p
Common NameEUGRSUZ_I00291
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family ERF
Protein Properties Length: 331aa    MW: 35512.8 Da    PI: 9.1993
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.I00291.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.31.2e-10134163235
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgk 35 
                       +y+GVr+++ +g+W+AeIrd +     +  r++lg+
  Eucgr.I00291.1.p 134 KYRGVRQRP-WGKWAAEIRDpF-----KaSRVWLGT 163
                       8********.**********66.....56*****98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.8E-15133163IPR001471AP2/ERF domain
CDDcd000187.29E-16134174No hitNo description
PROSITE profilePS5103214.065134163IPR001471AP2/ERF domain
PfamPF008475.4E-5134163IPR001471AP2/ERF domain
SuperFamilySSF541713.99E-9134172IPR016177DNA-binding domain
SMARTSM003802.9E-12134178IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MSIMVSALRR VVSGEVLSGD DQQQQFNLSG GYEPAALLGR SSSLDSVGVG QKRGRGDSTS  60
SSEFLVSQDS VAFGGFPQAG SSSSSDAREG HAGSTTVETA KADTADGTAP KYEYNYEAPT  120
TMAASRLDPT VRRKYRGVRQ RPWGKWAAEI RDPFKASRVW LGTGSKAKLN FPENVRLRQQ  180
PAPVASAAFP SATHFTISRE LPASGNFDAT GYDGQAPMQQ FPENDFREYH RDVAAHQERL  240
QGRTMSLYEQ MLFSNSSFGS QFQPAFSLSP SSSSSSSSVL ARSPNSSLFM PSPPNVTSRS  300
QESRRGSGDG AAVFSQHPWT DSSHYSSSSG *
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.I00291.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010027737.10.0PREDICTED: ethylene-responsive transcription factor ABR1 isoform X1
TrEMBLA0A059AJY40.0A0A059AJY4_EUCGR; Uncharacterized protein
STRINGXP_010027737.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM10281650
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.17e-20related to AP2 6