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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Eucgr.H04742.1.p |
| Common Name | EUGRSUZ_H04742, LOC104415760 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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| Family |
HD-ZIP |
| Protein Properties |
Length: 344aa MW: 38171.1 Da PI: 5.5585 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Eucgr.H04742.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 58 | 1.6e-18 | 68 | 121 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k
Eucgr.H04742.1.p 68 KKRRLSIDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 121
4557999**********************************************9 PP
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| 2 | HD-ZIP_I/II | 129.3 | 1.5e-41 | 67 | 159 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++y+alk + ++L++++e+L++e+ke
Eucgr.H04742.1.p 67 EKKRRLSIDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKSSYEALKLSYDALKHDNEALHKEIKE 159
69****************************************************************************************987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MKRLGSSDSL GALMSICPPS EELQHSPRNG NPIYHSRDLQ SMLELGLDEE GCVEDQSAGG 60
GGHVGGEKKR RLSIDQVKAL EKNFEVENKL EPERKVKLAQ ELGLQPRQVA VWFQNRRARW 120
KTKQLERDYG VLKSSYEALK LSYDALKHDN EALHKEIKEL KSKLREEDDN PESNLSVKEE 180
VIIPSHDVSD KIRAADDGDD DTKRSPPPPI TAPPRELSFN NGGLKDGSSD SDSSAIVNEE 240
NAATSSSSPN PAVQSHGGFL KFMGSSSSSA SPPPPPPASF GGCFSFQFQR AYQPQPQPPH 300
HHHHHSPYVK MEEHNFLGGE EDCNFFSDEQ APTLHWYCPD QWN*
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| Nucleic Localization
Signal ? help
Back to Top |
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| No. |
Start |
End |
Sequence |
| 1 | 115 | 123 | RRARWKTKQ |
