PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.H04135.1.p
Common NameEUGRSUZ_H04135
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 262aa    MW: 27529.1 Da    PI: 9.2589
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.H04135.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.82.9e-30361259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                      +Dg++WrKYGqK  kg+++pr+YYrCt+a gCpv+k+++r+ +d++++++tYeg+Hnh+
  Eucgr.H04135.1.p  3 SDGCQWRKYGQKLAKGNPCPRAYYRCTMAiGCPVRKQIQRCVRDKTILITTYEGKHNHP 61
                      7*********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081129.264163IPR003657WRKY domain
SMARTSM007747.8E-34262IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.2E-29263IPR003657WRKY domain
SuperFamilySSF1182904.45E-26263IPR003657WRKY domain
PfamPF031066.7E-26461IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    Send to blast
MISDGCQWRK YGQKLAKGNP CPRAYYRCTM AIGCPVRKQI QRCVRDKTIL ITTYEGKHNH  60
PLPPTAAVLA KTTSAAASML LSGSTATEAA PNGNSNPSFL SSSNNFLFPH HFLYSNSSTM  120
ASLSSSSPNY PTITLDLAQA PLINNHSLHS QRALSSTPNC QTQNIPPSNG YPGFQGHPQM  180
HMLPPPQAQH LLLNNQYPSS LMGNVGATIA SDPSFGSKLA IAISSMVGAS ATNPGMLNGN  240
TNGCTNISSS TSAIIAHGDA S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-211641375WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.H04135.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010024882.10.0PREDICTED: probable WRKY transcription factor 47
RefseqXP_010024883.10.0PREDICTED: probable WRKY transcription factor 47
SwissprotQ9XEC35e-54WRK42_ARATH; WRKY transcription factor 42
TrEMBLA0A059B6X00.0A0A059B6X0_EUCGR; Uncharacterized protein
STRINGXP_010024882.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM71562743
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.12e-44WRKY family protein