PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.H02602.1.p | ||||||||
Common Name | EUGRSUZ_H02602 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 236aa MW: 25953 Da PI: 9.9084 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.4 | 2.9e-09 | 51 | 93 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 Er+RR ri++++ +Lr+l+P+ + K++ +iL A eYI +L Eucgr.H02602.1.p 51 VTERKRRTRIKEGLYTLRSLVPNiS------KMDMTSILGDAAEYIVNL 93 46*********************66......***************877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.54E-9 | 43 | 96 | No hit | No description |
SuperFamily | SSF47459 | 7.33E-15 | 43 | 109 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 13.668 | 44 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.7E-8 | 50 | 99 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.8E-7 | 51 | 93 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.3E-14 | 51 | 113 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence Send to blast |
MKQSVVESME SKDSKSLSKQ TNLSGCHVGA AKRKGVDKQQ EGGKCQAKNL VTERKRRTRI 60 KEGLYTLRSL VPNISKMDMT SILGDAAEYI VNLETEMRKL KEELEKSEKE LCRLKDTDSK 120 SLARTVGHGW GKSLAGKLDN LEISRLDLKT NPKAQVEVNQ IGNGDFLVKI LMSQKHGWFA 180 GMMDGINSLG YTVVDANVTT LNGKVLANLM LELSDGALPK NLRESLMQLA SLISQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.H02602.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010026676.1 | 1e-166 | PREDICTED: transcription factor bHLH90 | ||||
TrEMBL | A0A059B1V8 | 1e-170 | A0A059B1V8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010026676.1 | 1e-165 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6985 | 27 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G16910.1 | 4e-18 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.H02602.1.p |