PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Eucgr.H02330.1.p | ||||||||
Common Name | EUGRSUZ_H02330 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 171aa MW: 19578 Da PI: 9.4617 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.1 | 7.7e-13 | 76 | 130 | 5 | 59 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +++rr+++NRe+ArrsR RK++ +e+L++ v L eN++L ++l l v++l Eucgr.H02330.1.p 76 RKQRRMISNRESARRSRMRKQKHLENLRNQVNRLRVENRDLTNRLRLLLCYVQRL 130 79****************************************9998876666555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.6E-10 | 71 | 130 | No hit | No description |
SMART | SM00338 | 2.9E-11 | 72 | 136 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.932 | 74 | 123 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.3E-10 | 76 | 128 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.06E-11 | 76 | 124 | No hit | No description |
CDD | cd14702 | 9.12E-20 | 77 | 125 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 79 | 94 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 171 aa Download sequence Send to blast |
MLPSDPILDN PFLSFGNGFP PWDCPDLFPA VETPPRPLDS SSGSDGPNPN QDNPSNSNSS 60 LTSSDLNQAS PVVDERKQRR MISNRESARR SRMRKQKHLE NLRNQVNRLR VENRDLTNRL 120 RLLLCYVQRL QIDNDLMRSE HVKLRQKLSE ICHVLLLQQQ LHQQHGHATT * |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 88 | 95 | RRSRMRKQ |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Eucgr.H02330.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010023331.1 | 1e-111 | PREDICTED: LOW QUALITY PROTEIN: bZIP transcription factor 2 | ||||
TrEMBL | A0A059B023 | 1e-119 | A0A059B023_EUCGR; Uncharacterized protein | ||||
STRING | XP_010023331.1 | 1e-111 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3338 | 26 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37730.1 | 5e-16 | basic leucine-zipper 7 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Eucgr.H02330.1.p |