|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Eucgr.G02322.1.p |
Common Name | EUGRSUZ_G02322, LOC104453797 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
Family |
CO-like |
Protein Properties |
Length: 464aa MW: 51186 Da PI: 5.7021 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.G02322.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 28.6 | 2.9e-09 | 21 | 64 | 3 | 40 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
+r C+++ + +++++C ++ +lC++C + H+ H++v
Eucgr.G02322.1.p 21 ARACDNCIQRRARWYCAADDAFLCQSCDRSVHSAnplarrHERV 64
578*****************************657888888876 PP
|
2 | CCT | 68.6 | 1.6e-23 | 405 | 448 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
Rea+++RY+eKr+tR+F+KkirYe+RK +Ae+RpR+KGrFvk+a
Eucgr.G02322.1.p 405 REAKVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRA 448
9*****************************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 464 aa
Download sequence Send
to blast |
MSPAVMIPHK NAANAFSGKT ARACDNCIQR RARWYCAADD AFLCQSCDRS VHSANPLARR 60 HERVRLKTAA TPQKHLGEFS SHHRKKPSSW HRGFTKKPRT PRGAKSALHR ATKPENAARN 120 PFPVVPEVGG DETSNEESEE HLLYRVPAYD PFVAEMCTSK GAEATAFSAE PETVAAFDGS 180 GDGDNRSKGL TDEVENLQEF LPSDADLAEF AADVESLLGR ALDTESFGIE GLGFVDCKER 240 DDNSMDCSLG SGGAIKVEEK EGVAEVVVEL GHDDMEMDVS KETFELNFDY DSPTTCGDEE 300 EEAKVIVELE GEKNVENCGA DEGTNISSEE RKKKKKREIF LRLDYEAVIS AWAGQGSPWT 360 TGERPDFSPD NCWPDFMGMS GLEFQNLYGE AGVHGGHVGM GDAGREAKVS RYREKRRTRL 420 FSKKIRYEVR KLNAEKRPRM KGRFVKRASS ASSSAPAFPL LNK*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 329 | 335 | ERKKKKK |
2 | 330 | 336 | RKKKKKR |
3 | 330 | 337 | RKKKKKRE |
4 | 415 | 431 | RRTRLFSKKIRYEVRKL |
Best hit in Arabidopsis thaliana ? help
Back to Top |
Hit ID |
E-value |
Description |
AT1G25440.1 | 1e-99 | B-box type zinc finger protein with CCT domain |