PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G01503.1.p
Common NameEUGRSUZ_G01503, LOC104453232
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 408aa    MW: 44709.2 Da    PI: 6.9349
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G01503.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.56.2e-33262317156
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                       k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  Eucgr.G01503.1.p 262 KQRRCWSPELHRRFVNALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 317
                       79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.389259319IPR017930Myb domain
SuperFamilySSF466895.68E-18260320IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-29260321IPR009057Homeodomain-like
TIGRFAMsTIGR015572.7E-27262317IPR006447Myb domain, plants
PfamPF002496.4E-8264315IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MGSIPPELSL DFRPSFVPAT IGDLLREVSA IGDARARSSR LDGYVARLQE EMHKIDAFKR  60
ELPLCMLLLK DAISALKMES EQCAAPTSAQ PVLEEFIPLK KDKDEDDEKL ELKKETDDSR  120
DKKNWMSSVQ LWNTDSSPSA VHSPDLKQEL KLETTANQAQ TLSATEDILE TCKGRNGGRP  180
FVQLKGYSPF SVTPVASAQE EKMKLPVQGL SLLSSGIKNP REKSFCTDAR TGCGRLIPSP  240
AHTVQSNLPS RGHQPPQQNA RKQRRCWSPE LHRRFVNALQ QLGGSQVATP KQIRELMQVD  300
GLTNDEVKSH LQKYRLHTRR ISSATSSPAD QSVAVLGGLW LSPDQYGDSP KGSSSQSDSP  360
QGPLQLGGSM GATTSTTGGN SMEDDEDEKS ECYSWKSHVN KPGKVDV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-14262315255Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-14262315255Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A7e-14262315154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-14262315154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-14262315154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-14262315154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-14262315255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-14262315255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-14262315255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-14262315255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-14262315255Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-14262315255Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G01503.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066057.10.0PREDICTED: myb family transcription factor EFM
TrEMBLA0A059BDS40.0A0A059BDS4_EUCGR; Uncharacterized protein
STRINGXP_010066057.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM145351021
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.12e-51G2-like family protein