PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.G00619.1.p
Common NameEUGRSUZ_G00619
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 442aa    MW: 48153.9 Da    PI: 8.7056
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.G00619.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.73.1e-30168226259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  Eucgr.G00619.1.p 168 SDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 226
                       7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.4E-33152228IPR003657WRKY domain
SuperFamilySSF1182901.44E-27160228IPR003657WRKY domain
PROSITE profilePS5081129.344162228IPR003657WRKY domain
SMARTSM007742.2E-37167227IPR003657WRKY domain
PfamPF031065.0E-27169226IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MKTEELCVLK KEMDRMKEEN KALRRVVEQT MKEYNDLQLK FDDVHQSNQS KDPSTFLSLY  60
TNGKPDHEPK SMSNPKDNSP SPSPKNDALR ESDLGLSLGL QIGANPQGIQ VHKEDGIRKD  120
QNHTNFPLIH DKIQRNDQFA GVTSHVASMP NRKSRVTVRA RCEAATLSDG CQWRKYGQKI  180
AKGNPCPRAY YRCTVAPGCP VRKQVQRCLE DMSILITTYE GTHNHPLPVG ATAMASTASN  240
AASFVLLDSS MNPLSSNGSM SSNFANAQPS LLPYHIANSS APSQFPRARS FNPSNDPSKG  300
IVLDLTHVNP YELPHNLPMR TTSAVNYPLS HLDTSWMSRR PSYDAFSGNS RGTDKPPGSA  360
ENVSASSFAC DPQFRVAVAA ALTSLINNKE KSGAIMSESH RPMEPSSSNR DGESGGSSNG  420
GGNNLVLESF SPNGKPIQLL P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-21154230176WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.G00619.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by potassium deprivation. {ECO:0000269|PubMed:15173595}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065508.10.0PREDICTED: probable WRKY transcription factor 9
SwissprotQ9C9F09e-70WRKY9_ARATH; Probable WRKY transcription factor 9
TrEMBLA0A059BA950.0A0A059BA95_EUCGR; Uncharacterized protein
STRINGXP_010065508.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM67362741
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.13e-61WRKY DNA-binding protein 9