PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.G00615.1.p

Common Name

EUGRSUZ_G00615, LOC104452736

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 322aa MW: 33077.7 Da PI: 6.8932

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.G00615.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.7	2.5e-13	240	298	4	61
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklks 61 +++rr++kNRe+A rsR+RK+a+++eLe v +Le+e +L ++e+e+ k+ ++l + Eucgr.G00615.1.p 240 QQKQRRMIKNRESAARSRERKQAYTAELESLVTQLEEEKARLlREEAEKSKERLKQLVK 298 689***********************************998538999999998888755 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	6.1E-13	232	299	No hit	No description
SMART	SM00338	1.9E-9	237	299	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.8E-11	239	298	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.68	239	291	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.25E-9	241	291	No hit	No description
CDD	cd14707	3.12E-18	241	287	No hit	No description
PROSITE pattern	PS00036	0	244	259	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence Send to blast
MASSKVMTST TSSRGNQDLP LQSSISSSLS ALISDLRDHH HSSSSHAAAA STNASAADSS 60 GTVTMDDLLK NIYSDDSPAT PDHSLFGHGG VGVVGDGAGM PGGGGGGGGD GGGIKTVDEV 120 WKDIVAGSDG ASGRGEEEMT LEDFLTKNGA VREEDVRIGG GGGGGAGGYC GEAAGDLNGH 180 LIQVGGPVGV GVGVGVGVGV GVGVGVGCGV SNNNGGIEGR VVVGRGKRRA VEEPVDKATQ 240 QKQRRMIKNR ESAARSRERK QAYTAELESL VTQLEEEKAR LLREEAEKSK ERLKQLVKNL 300 IPVVESRRPR RPLRRINSMN W*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.G00615.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010065506.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 6
TrEMBL	A0A059BAH9	0.0	A0A059BAH9_EUCGR; Uncharacterized protein
STRING	XP_010065506.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM3852	28	55

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44080.1	8e-18	bZIP family protein

Link Out ? help Back to Top
Phytozome	Eucgr.G00615.1.p
Entrez Gene	104452736