PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.F04119.1.p | ||||||||
Common Name | EUGRSUZ_F04119, LOC104450768 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 27069.7 Da PI: 6.8548 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.1 | 1.3e-12 | 68 | 120 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++++h +Er+RR+++ + ++ Lr+llP ++K ++ A++YI++L+ Eucgr.F04119.1.p 68 QKKMHRDIERQRRQEMSTLYASLRSLLPLeY---IKGKRATSDHISGAINYISHLE 120 6899*************************77...9*******************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.433 | 67 | 119 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.69E-10 | 68 | 124 | No hit | No description |
Pfam | PF00010 | 7.7E-10 | 68 | 120 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.44E-13 | 68 | 139 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.8E-11 | 69 | 141 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0012 | 73 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence Send to blast |
MFPLQPNNDL PYLPPNHYPI PEDRIIHHDQ DLLSLCITDR NDENKGLDKS VLISFSRSHK 60 RDADCDPQKK MHRDIERQRR QEMSTLYASL RSLLPLEYIK GKRATSDHIS GAINYISHLE 120 RKIKGLESKR DELKSGNRSA RALSVRPSLD GVEIVIQSTN SSDQDHDFRL SKVLQLLLEE 180 GIGVANCLST RSSEMTFIHT IQSEVYHAGC LDIARLQLKL DEVLMDYRLS DIVFAY* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.F04119.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010063759.1 | 1e-173 | PREDICTED: transcription factor bHLH118 | ||||
TrEMBL | A0A059BYH3 | 1e-172 | A0A059BYH3_EUCGR; Uncharacterized protein | ||||
STRING | XP_010063759.1 | 1e-173 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2968 | 27 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 1e-40 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.F04119.1.p |
Entrez Gene | 104450768 |