 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Eucgr.F03962.1.p |
| Common Name | EUGRSUZ_F03962 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
| Family |
NAC |
| Protein Properties |
Length: 142aa MW: 16289.4 Da PI: 8.0739 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Eucgr.F03962.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 82.3 | 1e-25 | 5 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lp G+rF P+de+ +++ L++kv+g+ + e+i+e+d+y+ ePw++ k+ e+++y F+k + k+ +r +r++ sgyW+ + +v+
Eucgr.F03962.1.p 5 LPIGYRFCPSDEQAISYCLAPKVKGEVVFP-EFIHEFDVYEKEPWKFFD--KNAEESLYVFTKLKMKK---SRVERTAGSGYWRGAQS-SDVK 90
699**********************99555.79**************62..3456789****998875...69***********7654.6777 PP
NAM 94 skkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
+ +++++glkk L f + +++++ek +W+mhey++
Eucgr.F03962.1.p 91 DCHNNVIGLKKHLNFKvkdgsSSNSQNTEKGSWIMHEYSV 130
77899***********887665677888999*******86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 142 aa
Download sequence Send
to blast |
MADTLPIGYR FCPSDEQAIS YCLAPKVKGE VVFPEFIHEF DVYEKEPWKF FDKNAEESLY 60
VFTKLKMKKS RVERTAGSGY WRGAQSSDVK DCHNNVIGLK KHLNFKVKDG SSSNSQNTEK 120
GSWIMHEYSV PNQEVSRIHL F*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-15 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-15 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-15 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-15 | 4 | 130 | 16 | 142 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swm_B | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swm_C | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swm_D | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swp_A | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swp_B | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swp_C | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 3swp_D | 1e-15 | 4 | 130 | 19 | 145 | NAC domain-containing protein 19 |
| 4dul_A | 1e-15 | 4 | 130 | 16 | 142 | NAC domain-containing protein 19 |
| 4dul_B | 1e-15 | 4 | 130 | 16 | 142 | NAC domain-containing protein 19 |
| Search in ModeBase |
