 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Eucgr.F03414.1.p |
Common Name | EUGRSUZ_F03414, LOC104450197 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
Family |
GRAS |
Protein Properties |
Length: 573aa MW: 64346.4 Da PI: 5.3016 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.F03414.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 423.4 | 1.9e-129 | 202 | 571 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93
l++lL++cA+ +s++d+++ ++l+++ + +s +g+p+qRl ay+ e+L ar +s+s++y++l+++e + ++ l+++++++e++P+lkf
Eucgr.F03414.1.p 202 LKQLLIACAKSLSDNDMHKFEKLIEKARRAVSISGEPIQRLGAYMIEGLVARKEESGSNIYHTLRCREPE---GKDLLSYMHILYEICPYLKF 291
689******************************************************************9...9******************* PP
GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
++++aN aI ea ++e+r+HiiDf+i qG+QW +LlqaLa+Rp+gpp +RiTg+++p + + le+++ rLa + e++++p+efn + +
Eucgr.F03414.1.p 292 GYMAANGAIAEACKNEDRIHIIDFQIAQGTQWTTLLQALAARPSGPPYVRITGIDDPVNRyaRGAGLEAVAGRLAVISEKFKIPVEFNG-LPE 383
*********************************************************9999999*************************.599 PP
GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
d++ ++L+v+pgEalaVn+ lqlh+++desv+++++rd +L++vkslsPkv++++eqe+++n+++Fl+rf+e+l+yy a+f+s++++lpr
Eucgr.F03414.1.p 384 FAPDVTRDMLDVRPGEALAVNFPLQLHHTPDESVDITNPRDGLLRMVKSLSPKVITLIEQESNTNTTPFLTRFVETLDYYLAMFESIDVTLPR 476
999****************************************************************************************** PP
GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
+ +eri+vE+++l+r+ivn++aceg+er+erhe ++kW++rl++aGF+++pls+++++ ++ llr ++ + y++ e++g ++lgWkdr Lvs+
Eucgr.F03414.1.p 477 DRKERINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLTMAGFRQYPLSSYVNSVIRNLLRYYS-ENYTLVEKDGGMLLGWKDRFLVSA 568
*****************************************************************999.55********************** PP
GRAS 371 SaW 373
SaW
Eucgr.F03414.1.p 569 SAW 571
*** PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 573 aa
Download sequence Send
to blast |
MESHPLYRYS ETGAGLSFTS SHPTVPSLPN RLFGHSKFEI RESPISPFST NFDCETLTVL 60 SDNQEQYSST DNYSGVSSSY NSSLETTSGF QRSSPSQDGC RDSLLSCSGR PTSLQNEHHS 120 QNTAYTLQEL EDVLMDDGQE VRVTDTSIGE HVWDQNPRGS QFSCPEDSVA FIQSQSGKSV 180 HAEKHKEAIE ELLVQDVPPG DLKQLLIACA KSLSDNDMHK FEKLIEKARR AVSISGEPIQ 240 RLGAYMIEGL VARKEESGSN IYHTLRCREP EGKDLLSYMH ILYEICPYLK FGYMAANGAI 300 AEACKNEDRI HIIDFQIAQG TQWTTLLQAL AARPSGPPYV RITGIDDPVN RYARGAGLEA 360 VAGRLAVISE KFKIPVEFNG LPEFAPDVTR DMLDVRPGEA LAVNFPLQLH HTPDESVDIT 420 NPRDGLLRMV KSLSPKVITL IEQESNTNTT PFLTRFVETL DYYLAMFESI DVTLPRDRKE 480 RINVEQHCLA RDIVNIIACE GKERVERHEL FGKWKSRLTM AGFRQYPLSS YVNSVIRNLL 540 RYYSENYTLV EKDGGMLLGW KDRFLVSASA WY*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | May play a regulatory role in the early step of oligosaccharide elicitor response, downstream of the membrane-associated high-affinity chitin-binding protein. {ECO:0000269|PubMed:12591613}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: By oligosaccharide elicitor (N-Acetylchitooligosaccharide) extracted from the rice blast fungus (M.grisea) cell wall. Strongest induction by chitin oligomer with greater degree of polymerization (heptamer). By inoculation of M.grisea in rice cell suspension culture. {ECO:0000269|PubMed:12591613}. |