PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Eucgr.F03236.1.p

Common Name

EUGRSUZ_F03236, LOC104450071

Organism

Eucalyptus grandis

Taxonomic ID

71139

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

BES1

Protein Properties

Length: 321aa MW: 34534.6 Da PI: 8.7018

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.F03236.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	189.6	1.2e-58	2	140	1	149
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspess 93 +++ r+ptw+ErEnnkrRERrRRa+aaki++GLR++Gnyklpk++DnneVlkALc eAGw+ve+DGttyrkg+kp e+ +++ +s+++sp+ss Eucgr.F03236.1.p 2 TSGSRMPTWRERENNKRRERRRRAVAAKIFSGLRMYGNYKLPKHCDNNEVLKALCDEAGWIVEADGTTYRKGCKPVEHVDMVARSETVSPSSS 94 5789***************************************************************************************** PP DUF822 94 lqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149 + ++ ++sp sssfpsp+s+ + +a+a + l+p+l++ s++sss Eucgr.F03236.1.p 95 YY------------PTHNPSPGSSSFPSPASSFYAANANAdgSFLIPWLKNFSSASSS 140 98............66777777788777766444433333348889999998886665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.1E-58	4	134	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MTSGSRMPTW RERENNKRRE RRRRAVAAKI FSGLRMYGNY KLPKHCDNNE VLKALCDEAG 60 WIVEADGTTY RKGCKPVEHV DMVARSETVS PSSSYYPTHN PSPGSSSFPS PASSFYAANA 120 NADGSFLIPW LKNFSSASSS ASSSKLPHLY IPGSSISAPV TPHLSSPTAR SPRIKTGLDD 180 QSTRFGWGER YSFMPSSTPP SPGHQILPDP EWISRIQIPQ GGPVSPTFTL VSSNPFGSKQ 240 EVLAVGGSRT WTPGQSGTCS PAIAAAADHT GDIPMSEVMS NEFAFGVSGK GLVKPWEGER 300 IHDEPGSDDL ELTLGGSKCR *

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	4e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	4e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	4e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	4e-24	6	77	372	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.F03236.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP721491	0.0	KP721491.1 Eucalyptus grandis brassinazole-resistant 1 protein (BES4) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010062789.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4
Swissprot	Q9ZV88	1e-117	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A059BUW8	0.0	A0A059BUW8_EUCGR; Uncharacterized protein
STRING	XP_010062789.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM1917	27	81

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-106	BES1/BZR1 homolog 4

Link Out ? help Back to Top
Phytozome	Eucgr.F03236.1.p
Entrez Gene	104450071