PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F03075.1.p
Common NameEUGRSUZ_F03075, LOC104449918
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 371aa    MW: 39246.7 Da    PI: 7.5538
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F03075.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.12.3e-14131176247
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       ++WT+eE+ +++ + ++lG+g+W+ Iar + ++Rt+ q+ s+ qky
  Eucgr.F03075.1.p 131 NPWTEEEHRRFLIGLQKLGKGDWRGIARDFVTTRTPTQVASHAQKY 176
                       69*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129418.769125181IPR017930Myb domain
SuperFamilySSF466891.2E-16127182IPR009057Homeodomain-like
TIGRFAMsTIGR015574.4E-17128180IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.4E-11129174IPR009057Homeodomain-like
SMARTSM007174.4E-10129179IPR001005SANT/Myb domain
PfamPF002491.6E-11131176IPR001005SANT/Myb domain
CDDcd001671.50E-8132176No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MTRRCSHCCN KGHNSRTCPV RGGGGDGGGA AAAPSSSSPS TSSSGAAAAA AASASGGGVK  60
LFGVRLTDGS IMKKSASVGC LSAAHYHSSS SAAASPNPGS SPIDGSDGYL SDDPAPGSRS  120
SNRRVERKKG NPWTEEEHRR FLIGLQKLGK GDWRGIARDF VTTRTPTQVA SHAQKYYIRQ  180
SNAGRRKRRS SLFDMAPDMA TADQPSHPEE TFLPPLVRLN DDTNSTTSTS MGLDLERTPM  240
ETSHPETSEG GGDVAMESID QVPLVPCYFP YYLPLPFPMW PPNMAPPEDG RVVETSHHRV  300
LKPIPVIPKE PLNIDQIVGM SQLSLAENEP APLSLKFLGE TSRQSAFIKA PSSVNESDLD  360
NCKDGATQAA *
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F03075.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010062531.10.0PREDICTED: myb-like protein H
TrEMBLA0A059BUP70.0A0A059BUP7_EUCGR; Uncharacterized protein
STRINGXP_010062531.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM93132735
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.14e-58MYB_related family protein