PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F02401.1.p
Common NameEUGRSUZ_F02401
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 333aa    MW: 36944 Da    PI: 5.8385
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F02401.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like49.77.9e-161561842755
           G2-like  27 AtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Eucgr.F02401.1.p 156 ATPKSVLELMNVKDLTLAHVKSHLQMYRT 184
                       9***************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.1E-14154185IPR009057Homeodomain-like
SuperFamilySSF466897.7E-6154185IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-11156184IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MTPPPTFPDL SLQINPPGVP DSGKKVAIYD CDDFARKPFC SEMSSTTDSA SSGSDLSHEN  60
NFLSQERSFS HGHGEPTLSL GFAMGDVNHS TLQQPPRNLN HHHHPHLYSR EKRKEDEKQE  120
KPRLLLINST CFDSEKGYQK WVVKKFNPIE CDFTGATPKS VLELMNVKDL TLAHVKSHLQ  180
MYRTVKSTDK GSSGQVQTLD VGTKHVEAGS LSSEKHEDCD NSYSLNPSSQ ASFKQTQGGL  240
LWLQSMETSG TSESDHENAL TYDSHFKAND AKVDGQKIID RRMSEDAKER LDSSSLSPPP  300
EDALVNLEFT LGRPSWQMDC TESSPELTLL KC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F02401.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010061802.10.0PREDICTED: probable transcription factor KAN4 isoform X1
TrEMBLA0A059BRR30.0A0A059BRR3_EUCGR; Uncharacterized protein
STRINGXP_010061802.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM65722844
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42630.16e-29G2-like family protein