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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.F02138.1.p | ||||||||
Common Name | EUGRSUZ_F02138 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 193aa MW: 21184.3 Da PI: 10.1711 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 41.2 | 2.9e-13 | 5 | 51 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+ErrRR+riN +++Lr+llP+ K++Ka+ L ++v+ +k+L Eucgr.F02138.1.p 5 RSHKEAERRRRQRINAHLSTLRSLLPST-----SKMDKASLLAQVVHRVKKL 51 78*************************7.....6************999988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.51 | 2 | 51 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.7E-11 | 5 | 51 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 5.99E-11 | 5 | 56 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 4.9E-13 | 5 | 55 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.83E-13 | 5 | 58 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.1E-12 | 8 | 57 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF55021 | 1.3E-5 | 93 | 165 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 3.6E-5 | 96 | 164 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MTASRSHKEA ERRRRQRINA HLSTLRSLLP STSKMDKASL LAQVVHRVKK LRCQVADVAR 60 RDGPACLCPE LPGPLPSESD EASLSRCSGE EGLVEATVCC DDRPSLNRDL GQVVRAFGAR 120 VVRAEMATLA GRTRCVLRIK WAGRESEFGG LKRALRMVME NRALDCGPDR VAVGDKRTRA 180 YSSIDTGVDD RL* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.F02138.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010064697.2 | 1e-135 | PREDICTED: putative transcription factor bHLH107 | ||||
TrEMBL | A0A059BQQ8 | 1e-134 | A0A059BQQ8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010064697.1 | 1e-134 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM18858 | 6 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 3e-21 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.F02138.1.p |