PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F01867.1.p
Common NameEUGRSUZ_F01867, LOC104448994
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 160aa    MW: 17603.6 Da    PI: 7.9739
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F01867.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31.1e-103182556
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
                      ++ +r+++NRe+ArrsR RK++ +  L+  v  L +eN +    +    ++ 
  Eucgr.F01867.1.p 31 RKRKRMESNRESARRSRMRKQKHLGDLTCQVTRLAKENNQILTGITVAAQHL 82
                      6789**********************************98776665555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-152791IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1282992IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.5E-1130105No hitNo description
SuperFamilySSF579595.69E-113181No hitNo description
PfamPF001701.1E-83176IPR004827Basic-leucine zipper domain
CDDcd147022.38E-163282No hitNo description
PROSITE patternPS0003603449IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    Send to blast
MASSSGNSSS TARLQNSGSE GEPQQLRMDQ RKRKRMESNR ESARRSRMRK QKHLGDLTCQ  60
VTRLAKENNQ ILTGITVAAQ HLTNVESENS ILRAQVTELS HRLDSLNEIL NSIYQSSGTA  120
DADQGLDLCS PYDGFFTSPV NLGCVSHQIM AASDVFECR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13051RKRKRMESNRESARRSRMRKQK
24350RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F01867.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010061275.11e-115PREDICTED: bZIP transcription factor 44
SwissprotC0Z2L55e-47BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A059BQM51e-113A0A059BQM5_EUCGR; Uncharacterized protein
STRINGXP_010061275.11e-114(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50128154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.14e-47basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]