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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.F01674.1.p | ||||||||
Common Name | EUGRSUZ_F01674, LOC104448857 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bZIP | ||||||||
Protein Properties | Length: 258aa MW: 27294.9 Da PI: 11.1443 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.6 | 4.7e-12 | 185 | 235 | 2 | 52 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +++++ +r kNRe+A rsR+R++a++ Le +++ L++eN +L+ + e+l Eucgr.F01674.1.p 185 RRDRKFKRSVKNRESAARSRARRQAYTSGLEIEIAHLQKENAKLRRQQEKL 235 789999***************************************988877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.4E-7 | 184 | 252 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.3E-11 | 184 | 236 | No hit | No description |
Pfam | PF00170 | 6.7E-10 | 185 | 235 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.576 | 186 | 236 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.31E-9 | 188 | 236 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 191 | 206 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence Send to blast |
MSAMWSKPCL NKNNANTAAS NGSNPENSGV AVVAYSLSSP LPFSPLSPIP TASSASIKSM 60 EDIWKDINLA FLKDTPGHCP PASPAAISTS VDGVVGLQGA ALTNFLAGPA RDYSPRGSAF 120 GSDVPATRLS LNSTGPDDQG VAAAGRVQVP SGRRRGVGPE APPLVTGFSP LRVKSISDIG 180 GGSDRRDRKF KRSVKNRESA ARSRARRQAY TSGLEIEIAH LQKENAKLRR QQEKLRLAPP 240 PEIPKKKRLQ RTFTAPF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.F01674.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010061083.1 | 0.0 | PREDICTED: protein FD | ||||
Refseq | XP_010061084.1 | 0.0 | PREDICTED: protein FD | ||||
TrEMBL | A0A059BPP8 | 0.0 | A0A059BPP8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010061083.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-20 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.F01674.1.p |
Entrez Gene | 104448857 |