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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Eucgr.F01474.1.p |
Common Name | EUGRSUZ_F01474, LOC104448684 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family |
NF-YC |
Protein Properties |
Length: 266aa MW: 29658.5 Da PI: 5.9676 |
Description |
NF-YC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.F01474.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YC | 176.6 | 2.4e-55 | 83 | 187 | 1 | 102 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90
ql++fw+ q ie+++dfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fd
Eucgr.F01474.1.p 83 QLQMFWAGQmqeIEQTQDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFD 175
89****98877789******************************************************************************* PP
NF-YC 91 flvdivprdelk 102
flvdi+prdelk
Eucgr.F01474.1.p 176 FLVDIIPRDELK 187
*********975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MDQTEQTQQQ QQQQQVVGVV AGTNQMAYAP PFPTAPVVAP GTPAVPIPSP TQAPSTFPGS 60 PHQLAYQQAQ HFHHQQHQQQ QQQLQMFWAG QMQEIEQTQD FKNHSLPLAR IKKIMKADED 120 VRMISAEAPV VFAKACEMFI LELTLRSWIH TEENKRRTLQ KNDIAAAISR TDVFDFLVDI 180 IPRDELKEEG LGVTKATIPV VGSPADIPYY YVPPQHPMGH PSTIMGKPAD QAALYAAQQP 240 QPPVSFMPWP HAQSQQTQDD QQTNS*
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Functional Description ? help
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Source |
Description |
UniProt | Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters. {ECO:0000250}. |
Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Li S, et al.
HEAT-INDUCED TAS1 TARGET1 Mediates Thermotolerance via HEAT STRESS TRANSCRIPTION FACTOR A1a-Directed Pathways in Arabidopsis. Plant Cell, 2014. 26(4): p. 1764-1780 [PMID:24728648] - Mei X, et al.
Identification and characterization of paternal-preferentially expressed gene NF-YC8 in maize endosperm. Mol. Genet. Genomics, 2015. 290(5): p. 1819-31 [PMID:25851237] - Baud S, et al.
Deciphering the Molecular Mechanisms Underpinning the Transcriptional Control of Gene Expression by Master Transcriptional Regulators in Arabidopsis Seed. Plant Physiol., 2016. 171(2): p. 1099-112 [PMID:27208266] - Zhao H, et al.
The Arabidopsis thaliana Nuclear Factor Y Transcription Factors. Front Plant Sci, 2016. 7: p. 2045 [PMID:28119722]
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