PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F01449.1.p
Common NameEUGRSUZ_F01449
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 335aa    MW: 37336.8 Da    PI: 7.7085
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F01449.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM164.63.5e-51431661128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhP+d+elv++yL kk+++++  l   + evd++k+ePw++p+++  + kewyf+s+rd+kyatg r+nrat+sgyWkatgkd++vl
  Eucgr.F01449.1.p  43 LPPGFRFHPKDDELVCDYLMKKMTRSDSLL---MIEVDLNKCEPWEIPETACVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRAVL 132
                       79*********************9999444...889************7777799************************************** PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + kg+lvg++ktLvfy+grapkg+ktdWvmhe+r+
  Eucgr.F01449.1.p 133 R-KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRV 166
                       9.999****************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-6032193IPR003441NAC domain
PROSITE profilePS5100555.44443193IPR003441NAC domain
PfamPF023658.2E-2744166IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MPTDHLSLLP SPTPLSLSLS LSLSLSLCET QKMSNISMVE AKLPPGFRFH PKDDELVCDY  60
LMKKMTRSDS LLMIEVDLNK CEPWEIPETA CVGGKEWYFY SQRDRKYATG LRTNRATASG  120
YWKATGKDRA VLRKGTLVGM RKTLVFYQGR APKGRKTDWV MHEFRVEGPH GPPNITKISS  180
LKEDWVLCRV FFKSVEVATK PSTGIVSCYD NRGTSSLPSL MDSFITFDQA HPQPNLISNI  240
EQVPCFSIFS PSQANPIHVE PSMPARTILN ASAFGAMPDF SSCNNLDSYA CDRKVLKAVL  300
NQLTEMDSPS LGDQGSSESF LSEVAMPNNM WNHF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-513919611171Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F01449.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by auxin.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060830.10.0PREDICTED: NAC domain-containing protein 21/22
SwissprotQ84TE61e-117NAC22_ARATH; NAC domain-containing protein 21/22
TrEMBLA0A059BPP90.0A0A059BPP9_EUCGR; Uncharacterized protein
STRINGXP_010060830.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM36192859
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56010.21e-119NAC domain containing protein 1
Publications ? help Back to Top
  1. Le Hénanff G, et al.
    Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance.
    J. Exp. Bot., 2013. 64(16): p. 4877-93
    [PMID:24043850]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Xiao D, et al.
    SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1275-91
    [PMID:26304848]
  4. Huo X,Wang C,Teng Y,Liu X
    Identification of miRNAs associated with dark-induced senescence in Arabidopsis.
    BMC Plant Biol., 2015. 15: p. 266
    [PMID:26530097]
  5. Chen X, et al.
    Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis.
    Plant Physiol., 2016. 170(4): p. 2136-45
    [PMID:26850273]
  6. Liu C,Wang B,Li Z,Peng Z,Zhang J
    TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth.
    Plant Physiol., 2018. 176(1): p. 742-756
    [PMID:29122985]